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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922257.1_cds_XP_016471091.1_63472
CDS Infomation

[gene=LOC107793279] [db_xref=GeneID:107793279] [protein=probable tocopherol O-methyltransferase, chloroplastic isoform X2] [protein_id=XP_016471091.1] [location=complement(join(47412..47515,47603..47705,47843..48046,48138..48242,48720..48889,50163..50577))] [gbkey=CDS]
Sequence

ATGAGCAGCACCTGCTATTCTGCTTCTTCTATCCAATCACTTAACCCCACGTGTCCCTCT
TCCCTTATCTTCACTCTCCATAAACCCCAGTTGCTACAGATTCACAGTATCAAAGAAACA
AAAAGAACAAGAACTGTTAGAACTTATAATAGTAACACTAGAACAAGAAGAAGAATGACT
AGTGTTGCTGCAATGAATGCTGTGTCATCACCAGAAGTTGAAGTACAGAATCAACAGGAG
TTGAAAAAAGGAATTGCAGAATTATATGATGAGTCATCTGGGATTTGGGAAGATATTTGG
GGTGACCATATGCATCATGGATTTTATGAACCTCAATCATCTGTTTCACTTTCTGATCAT
CGTGCTGCTCAGATCCGTATGATTGAAGAGTCTCTACGTTTTGCTTCTGTTTCTGATGAT
CCAGCAAAGAAACCAAGGTCCATAGTTGATGTTGGATGTGGGATAGGAGGCAGTTCTAGG
TACCTTGCAAAGAAATATGGCGCTACAGCTCAAGGCATCACGTTGAGTCCTGTACAAGCC
GAGAGGGCTCAAGCTCTTGCTGCTGCTCAAGGATTAGGCGATAAGGTTTCTTTTCAAGTT
GCAGACGCCTTGAATCAGCCATTTCCAGACGGGCAATTTGACTTGGTTTGGTCCATGGAG
AGTGGAGAACACATGCCGGACAAACAAAAGTTTGTTGGCGAATTAGCTCGAGTGGCAGCA
CCAGGAGGCACAATCATACTTGTGACATGGTGCCACAGGGATCTTTCCCCTTCAGAGGAA
TCTCTGCTTCCAGAGGAGAAAGAGTTGTTAAATAAGATATGTAAATCCTTCTATCTTCCT
GCATGGTGTTCCACTGCTGATTATGTGAAGTTACTTCAATCTAACTCTCTTCAGGATATC
AAGGCAGCAGATTGGTCTGAGAATGTCGCTCCATTTTGGCCAGCAGTAATAAAATCTGCA
CTGACATGGAAGGGCTTTACATCAATCCTACGCAGTGGATGGAAGACAATCAAAGCTGCA
CTTGCAATGCCACTTATGATTGAAGGATACAAGAAGGGTCTGATCAAATTTGCCATCATC
ACTTGCCGTAAACCTGAGTAG

Peptide Sequence

PEP ID

XP_016471091.1
PEP Infomation

PREDICTED: probable tocopherol O-methyltransferase, chloroplastic isoform X2 [Nicotiana tabacum]
Sequence

MSSTCYSASSIQSLNPTCPSSLIFTLHKPQLLQIHSIKETKRTRTVRTYNSNTRTRRRMT
SVAAMNAVSSPEVEVQNQQELKKGIAELYDESSGIWEDIWGDHMHHGFYEPQSSVSLSDH
RAAQIRMIEESLRFASVSDDPAKKPRSIVDVGCGIGGSSRYLAKKYGATAQGITLSPVQA
ERAQALAAAQGLGDKVSFQVADALNQPFPDGQFDLVWSMESGEHMPDKQKFVGELARVAA
PGGTIILVTWCHRDLSPSEESLLPEEKELLNKICKSFYLPAWCSTADYVKLLQSNSLQDI
KAADWSENVAPFWPAVIKSALTWKGFTSILRSGWKTIKAALAMPLMIEGYKKGLIKFAII
TCRKPE

Transcript Sequence

Gene sequence data has not been registered.